STRINGSTRING
dnrO protein (Xanthomonas campestris campestris) - STRING interaction network
"dnrO" - Repressor in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnrORepressor; Predicted transcriptional regulator (339 aa)    
Predicted Functional Partners:
yjbJ
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (322 aa)
              0.845
gst2
Glutathione S-transferase (204 aa)
              0.605
adpA
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain (333 aa)
   
          0.531
XCC0069
Uncharacterized protein; Dihydrofolate reductase (253 aa)
 
        0.480
miaB
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (485 aa)
              0.469
trxB
Uncharacterized protein; Thioredoxin reductase (299 aa)
   
          0.419
Ada
DNA methylation and regulatory protein Ada or; 3-methyladenine DNA glycosylase (521 aa)
 
        0.410
XCC0235
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain (245 aa)
   
          0.410
petB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (419 aa)
         
  0.403
soxR
Predicted transcriptional regulators (148 aa)
   
          0.402
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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