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yjbJ protein (Xanthomonas campestris campestris) - STRING interaction network
"yjbJ" - Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjbJSoluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (322 aa)    
Predicted Functional Partners:
dnrO
Repressor; Predicted transcriptional regulator (339 aa)
              0.845
nlpC
Lipoprotein; Cell wall-associated hydrolases (invasion-associated proteins) (191 aa)
 
 
  0.620
gst2
Glutathione S-transferase (204 aa)
              0.603
XCC0733
Peptidase; Membrane proteins related to metalloendopeptidases (314 aa)
 
     
  0.530
XCC2584
Uncharacterized protein; Cell wall-associated hydrolases (invasion-associated proteins) (249 aa)
 
 
  0.522
miaB
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (485 aa)
              0.504
nlpD
Lipoprotein; Membrane proteins related to metalloendopeptidases (255 aa)
 
   
  0.429
petB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (419 aa)
              0.411
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (214 aa)
              0.411
petC
Cytochrome c1 (247 aa)
              0.409
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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