STRINGSTRING
XCC2308 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2308" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2308annotation not available (58 aa)    
Predicted Functional Partners:
lig2
ATP-dependent DNA ligase (849 aa)
 
          0.847
XCC2309
Virulence regulator; DNA-binding protein H-NS (193 aa)
              0.617
XCC0386
annotation not available (111 aa)
   
          0.551
XCC3723
Ketosteroid isomerase-related protein (188 aa)
   
          0.538
XCC4218
annotation not available (84 aa)
   
          0.498
CAP51045.1
annotation not available (275 aa)
   
          0.487
tcmJ
annotation not available (113 aa)
   
          0.414
XCC1402
annotation not available (138 aa)
   
          0.413
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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