STRINGSTRING
XCC2305 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2305" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2305annotation not available (627 aa)    
Predicted Functional Partners:
rnD
Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides; Belongs to the RNase D family (362 aa)
 
          0.732
cefD
Isopenicillin N epimerase; Selenocysteine lyase (415 aa)
   
   
  0.731
XCC2304
Virulence protein; Type IV secretory pathway VirJ component (415 aa)
              0.562
XCC2431
annotation not available (159 aa)
   
          0.543
ank2
Ankyrin-like protein; FOG- Ankyrin repeat (1107 aa)
 
          0.538
waaL
Membrane protein; Lipid A core - O-antigen ligase and related enzymes (444 aa)
   
          0.491
XCC2250
annotation not available (196 aa)
   
          0.490
XCC2390
annotation not available (161 aa)
   
          0.459
XCC3899
annotation not available (120 aa)
   
          0.449
XCC2656
annotation not available (60 aa)
   
          0.448
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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