STRINGSTRING
XCC2280 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2280" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2280annotation not available (141 aa)    
Predicted Functional Partners:
XCC2279
Ribonuclease; Guanyl-specific ribonuclease Sa (217 aa)
 
 
 
  0.985
sod5
Superoxide dismutase [Mn]; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems (203 aa)
              0.604
pcp
annotation not available (160 aa)
   
          0.597
XCC0490
Cobalamin biosynthesis protein CobD/CbiB (297 aa)
   
          0.525
XCC1836
annotation not available (82 aa)
   
          0.523
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins (296 aa)
   
          0.469
rpfE
Uncharacterized protein conserved in bacteria (306 aa)
   
          0.468
XCC1144
annotation not available (168 aa)
   
          0.450
XCC3848
annotation not available (220 aa)
   
          0.419
XCC1572
annotation not available (228 aa)
   
          0.418
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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