STRINGSTRING
XCC2275 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2275" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2275annotation not available (305 aa)    
Predicted Functional Partners:
XCC2274
GGDEF family protein; Predicted signal transduction protein containing a membrane domain an EAL and a GGDEF domain (705 aa)
 
     
  0.923
trmJ
tRNA (cytidine/uridine-2’-O-)-methyltransferase TrmJ; Catalyzes the formation of 2’O-methylated cytidine (Cm32) or 2’O-methylated uridine (Um32) at position 32 in tRNA (258 aa)
            0.760
XCC1583
annotation not available (332 aa)
   
          0.659
XCC3758
annotation not available (214 aa)
   
          0.656
XCC1558
Uncharacterized protein (111 aa)
   
          0.645
oprP2
Phosphate-selective porin (416 aa)
 
        0.620
XCC2941
annotation not available (170 aa)
   
          0.555
XCC1427
annotation not available (71 aa)
   
          0.552
XCC0557
annotation not available (127 aa)
   
          0.517
XCC0694
annotation not available (207 aa)
   
          0.513
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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