STRINGSTRING
CAP51277.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP51277.1" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51277.1annotation not available (191 aa)    
Predicted Functional Partners:
CAP51278.1
annotation not available (66 aa)
              0.816
dksA
RNA polymerase-binding transcription factor DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression (341 aa)
         
  0.664
XCC2258
Peptidase; Membrane proteins related to metalloendopeptidases (281 aa)
     
 
  0.534
pyrC
Dihydroorotase and related cyclic amidohydrolases (449 aa)
              0.488
XCC2256
Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane (93 aa)
              0.478
XCC1405
annotation not available (589 aa)
   
          0.427
XCC3557
annotation not available (179 aa)
   
          0.410
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (14%) [HD]