STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydB2Cytochrome bd-type quinol oxidase subunit 2 (383 aa)    
Predicted Functional Partners:
cydA2
Cytochrome bd-type quinol oxidase subunit 1
 
 0.997
msbA2
ABC-type multidrug transport system, ATPase and permease components
 
 
 0.912
XCC2813
Cytochrome bd-type quinol oxidase subunit 1
 
 0.898
cioA
Cyanide insensitive terminal oxidase; Cytochrome bd-type quinol oxidase subunit 1
 
 0.894
cydA1
Cytochrome bd-type quinol oxidase, subunit 1
 
 0.889
msbA3
ABC transporter ATP-binding protein; ABC-type multidrug transport system, ATPase and permease components
 
 
 
 0.849
XCC3022
Uncharacterized protein; Predicted thioesterase
      0.672
petB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
   
  
 0.661
XCC2234
Uncharacterized protein; Related to cytochrome d oxidase
       0.614
gshA
Glutamate--cysteine ligase; Gamma-glutamylcysteine synthetase
      
 0.585
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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