STRINGSTRING
XCC2215 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2215" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2215annotation not available (145 aa)    
Predicted Functional Partners:
XCC2390
annotation not available (161 aa)
   
          0.748
XCC2197
annotation not available (109 aa)
   
          0.711
XCC0823
annotation not available (76 aa)
   
          0.705
XCC1354
annotation not available (215 aa)
   
          0.701
XCC2431
annotation not available (159 aa)
   
          0.687
XCC1836
annotation not available (82 aa)
   
          0.670
XCC3453
UPF0250 protein XCC3453; Belongs to the UPF0250 family (130 aa)
   
          0.669
XCC3657
annotation not available (184 aa)
   
          0.656
uptF
annotation not available (72 aa)
   
          0.649
XCC2250
annotation not available (196 aa)
   
          0.649
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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