STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2207Uncharacterized protein conserved in bacteria (557 aa)    
Predicted Functional Partners:
XCC2203
Uncharacterized protein; Glucoamylase and related glycosyl hydrolases
 
     0.939
malE
ABC transporter sugar binding protein; ABC-type sugar transport system, periplasmic component
 
     0.924
malF
ABC-type sugar transport systems, permease components
 
     0.916
malG
ABC-type sugar transport system, permease component
 
     0.913
XCC2202
Uncharacterized protein; Exonuclease III
       0.848
XCC2208
Outer membrane receptor proteins, mostly Fe transport
 
     0.824
XCC4131
OmpA-related protein; Outer membrane receptor for ferrienterochelin and colicins
 
     0.525
XCC4132
OmpA-related protein; Outer membrane receptor for ferrienterochelin and colicins
 
     0.523
vapC
Ribonuclease VapC; Toxic component of a toxin-antitoxin (TA) module. An RNase
  
     0.499
XCC2209
Transcriptional regulators
       0.445
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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