STRINGSTRING
malF protein (Xanthomonas campestris campestris) - STRING interaction network
"malF" - ABC-type sugar transport systems, permease components in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malFABC-type sugar transport systems, permease components (294 aa)    
Predicted Functional Partners:
malE
ABC transporter sugar binding protein; ABC-type sugar transport system, periplasmic component (448 aa)
 
  0.987
malG
ABC-type sugar transport system, permease component (278 aa)
 
0.975
XCC2203
Uncharacterized protein; Glucoamylase and related glycosyl hydrolases (1054 aa)
 
          0.928
ugpC
Sugar ABC transporter ATP-binding protein; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily (364 aa)
 
  0.920
XCC2207
Uncharacterized protein conserved in bacteria (557 aa)
 
          0.916
XCC2202
Uncharacterized protein; Exonuclease III (315 aa)
         
  0.850
XCC2208
Outer membrane receptor proteins, mostly Fe transport (992 aa)
 
          0.755
gltT
Glutamate symport protein; Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid-cation symporter (DAACS) (TC 2.A.23) family (486 aa)
     
   
  0.705
holC
DNA polymerase III chi subunit (141 aa)
           
  0.702
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (383 aa)
 
 
  0.662
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (11%) [HD]