STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2202Uncharacterized protein; Exonuclease III (315 aa)    
Predicted Functional Partners:
XCC2203
Uncharacterized protein; Glucoamylase and related glycosyl hydrolases
 
     0.876
malE
ABC transporter sugar binding protein; ABC-type sugar transport system, periplasmic component
       0.854
malG
ABC-type sugar transport system, permease component
       0.854
malF
ABC-type sugar transport systems, permease components
     
 0.850
XCC2207
Uncharacterized protein conserved in bacteria
       0.848
dauE
Aklaviketone reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  
    0.718
CAP51862.1
Signal transduction kinase
  
     0.661
XCC2208
Outer membrane receptor proteins, mostly Fe transport
       0.633
XCC0700
annotation not available
  
     0.617
XCC0770
Uncharacterized protein
  
     0.582
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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