STRINGSTRING
traB protein (Xanthomonas campestris campestris) - STRING interaction network
"traB" - Uncharacterized homolog of PrgY (pheromone shutdown protein) in Xanthomonas campestris campestris
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traBUncharacterized homolog of PrgY (pheromone shutdown protein) (410 aa)    
Predicted Functional Partners:
pat
Phosphinothricin N-acetyltransferase; Sortase and related acyltransferases (175 aa)
            0.923
XCC2199
Beta-alanine synthetase; Predicted amidohydrolase (294 aa)
              0.898
XCC2198
Uncharacterized protein; Peptidylarginine deiminase and related enzymes; Belongs to the agmatine deiminase family (347 aa)
              0.741
XCC2197
annotation not available (109 aa)
              0.573
virB10
Type IV secretion system putative channel component VirB4; Type IV secretory pathway, VirB10 components (389 aa)
           
  0.487
lpxA
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (263 aa)
           
  0.483
lpxD
UDP-3-O-acylglucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell; Belongs to the transferase hexapeptide repeat family. LpxD subfamily (337 aa)
           
  0.483
nodL
Nodulation protein; Acetyltransferase (isoleucine patch superfamily) (199 aa)
           
  0.406
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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