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himD protein (Xanthomonas campestris campestris) - STRING interaction network
"himD" - Integration host factor subunit beta in Xanthomonas campestris campestris
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
himDIntegration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (103 aa)    
Predicted Functional Partners:
rpsA
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (559 aa)
 
   
  0.967
cmk
Cytidylate kinase; Unnamed protein product; Belongs to the cytidylate kinase family. Type 1 subfamily (226 aa)
     
  0.954
ihfA
Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (99 aa)
   
 
0.940
XCC2189
Epimerase/dehydratase protein; Predicted nucleoside-diphosphate sugar epimerases (635 aa)
         
  0.787
rfb303
Lipopolysaccharide core biosynthesis protein; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase (324 aa)
   
        0.770
lapB
Lipopolysaccharide assembly protein B; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane (392 aa)
              0.765
galU
UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase (297 aa)
              0.749
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily (361 aa)
         
  0.664
XCC2192
annotation not available (101 aa)
              0.647
nusA
Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination (503 aa)
   
 
 
  0.615
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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