STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2179Two-component system sensor protein; Predicted periplasmic ligand-binding sensor domain (1117 aa)    
Predicted Functional Partners:
XCC2180
Two-component system regulatory protein; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
 
 
 0.972
XCC2360
Signal transduction histidine kinase
 
 
 
 0.783
fhuA1
Outer membrane receptor proteins, mostly Fe transport
 
   
 0.740
tlpC
Methyl-accepting chemotaxis protein
  
 
 0.734
fecA2
Outer membrane receptor proteins, mostly Fe transport
      
 0.703
XCC1185
annotation not available
   
 
 0.689
XCC2176
Predicted membrane protein
 
     0.685
XCC2153
Two-component system sensor protein; FOG: PAS/PAC domain
   
 
 0.684
XCC2178
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
 
 
   0.683
XCC2177
Hydrolase; Amidases related to nicotinamidase
 
     0.650
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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