STRINGSTRING
XCC2174 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2174" - MFS transporter in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2174MFS transporter; Permeases of the major facilitator superfamily (543 aa)    
Predicted Functional Partners:
XCC2175
Uncharacterized protein; Predicted metal-dependent hydrolase with the TIM-barrel fold (613 aa)
 
          0.855
XCC2177
Hydrolase; Amidases related to nicotinamidase (218 aa)
 
          0.778
XCC2176
Predicted membrane protein (145 aa)
 
        0.530
XCC2179
Two-component system sensor protein; Predicted periplasmic ligand-binding sensor domain (1117 aa)
 
          0.482
XCC2052
Uncharacterized protein conserved in bacteria (102 aa)
 
          0.465
XCC2178
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain (155 aa)
              0.413
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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