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orn protein (Xanthomonas campestris campestris) - STRING interaction network
"orn" - Oligoribonuclease in Xanthomonas campestris campestris
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ornOligoribonuclease; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (194 aa)    
Predicted Functional Partners:
dnaQ
DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3’-5’ exonuclease (245 aa)
   
 
  0.824
cysQ
Sulfite synthesis pathway protein; 3-Phosphoadenosine 5-phosphosulfate (PAPS) 3-phosphatase (261 aa)
     
   
  0.795
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family (171 aa)
              0.754
XCC2170
Iron dependent repressor; Mn-dependent transcriptional regulator (155 aa)
              0.754
pstA
ABC-type phosphate transport system permease component (287 aa)
           
  0.735
XCC0260
Uncharacterized protein; Predicted hydrolase of the alpha/beta superfamily (220 aa)
           
  0.720
age
Uncharacterized protein; N-acyl-D-glucosamine 2-epimerase (401 aa)
            0.711
rne
Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs; Belongs to the RNase E/G family. RNase E subfamily (1194 aa)
   
     
  0.699
rnc
Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (226 aa)
   
   
  0.669
kdpD
Two-component system sensor protein; Osmosensitive K+ channel histidine kinase (888 aa)
     
   
  0.609
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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