STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2158Uncharacterized protein; Putative stress-responsive transcriptional regulator (66 aa)    
Predicted Functional Partners:
XCC2157
annotation not available
       0.898
XCC2838
Phage shock protein A (IM30) suppresses sigma54-dependent transcription
  
 
 0.760
XCC2360
Signal transduction histidine kinase
    
 
 0.647
phbC
Poly (3-hydroxybutyric acid) synthase; Unnamed protein product
       0.605
XCC2160
annotation not available
       0.591
XCC2426
Histidine kinase/response regulator hybrid protein; FOG: PAS/PAC domain
   
   0.531
rpfC
Sensory/regulatory protein RpfC; Member of the two-component regulatory system RpfG/RpfC, which is required for full virulence and for formation and dispersal of biofilms. Involved in sensing and responding to the diffusible signaling factor (DSF), which is essential for cell- cell signaling. RpfC is probably a sensor of environmental signals, including DSF, which is autophosphorylated at a histidine residue in response to the signal. Then, probably activates RpfG via a four-step phosphorelay. May also negatively regulate the production of DSF, independently of RpfG (By similarity)
    
 
 0.520
XCC0483
Two-component system sensor protein; Signal transduction histidine kinase
    
   0.518
pilL
Chemotaxis protein histidine kinase and related kinases
    
   0.518
pssA1
CDP-diacylglycerol-serine o-phosphatidyltransferase; Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family
       0.465
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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