STRINGSTRING
cycM protein (Xanthomonas campestris campestris) - STRING interaction network
"cycM" - Cytochrome c553 in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cycMCytochrome c553 (134 aa)    
Predicted Functional Partners:
XCC2144
Cytochrome c553 (128 aa)
     
0.969
petC
Cytochrome c1 (247 aa)
   
     
  0.728
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (214 aa)
 
     
  0.666
cox3
Heme/copper-type cytochrome/quinol oxidase subunit 3 (291 aa)
 
     
  0.645
petB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (419 aa)
 
     
  0.640
dsbD
C-type cytochrome biogenesis protein; Thiol-disulfide interchange protein (768 aa)
           
  0.615
XCC0254
Cytochrome c5 (172 aa)
 
     
  0.596
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (354 aa)
           
  0.582
fadH
NADH-flavin oxidoreductases Old Yellow Enzyme family (679 aa)
     
 
  0.555
XCC4133
annotation not available (506 aa)
     
 
  0.539
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (11%) [HD]