STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtBTransport protein; Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1166 aa)    
Predicted Functional Partners:
XCC2143
Cation efflux system protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
 
 0.988
mdtC
Transport protein; Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
 
    
0.923
mexA
Multidrug resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
 
 0.858
oprN2
Outer membrane protein
 
 
 0.760
toxG
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
 
 0.696
XCC1439
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
 
 0.677
tatB
Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation
    
 
 0.637
acrA2
Multidrug resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
 
 0.613
ybjY
ABC transporter permease; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
 
 
 0.601
yagT
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs
      
 0.589
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (7%) [HD]