STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zwf1Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone (485 aa)    
Predicted Functional Partners:
pgl
6-phosphogluconolactonase/Glucosamine-6- phosphate isomerase/deaminase
 
 0.997
pgi
Glucose-6-phosphate isomerase
 
 
 0.985
glk1
Glucokinase; Belongs to the bacterial glucokinase family
 
 
 0.978
gnd
6-phosphogluconate dehydrogenase
 
  
 0.895
edd
Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family
 
  
 0.895
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
 
 
 0.888
pykA
Pyruvate kinase; Belongs to the pyruvate kinase family
 
 
 0.878
gapA
Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
 
 0.869
gpm1
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
   
 0.869
gpm2
Phosphoglycerate mutase 1
   
 0.867
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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