STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpCSugar ABC transporter ATP-binding protein; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily (364 aa)    
Predicted Functional Partners:
malF
ABC-type sugar transport systems, permease components
 
 0.920
malG
ABC-type sugar transport system, permease component
 
 0.920
malE
ABC transporter sugar binding protein; ABC-type sugar transport system, periplasmic component
 
 
 0.855
malT
ATP-dependent transcriptional regulator
  
 
 0.614
potH
Polyamine transport protein; ABC-type spermidine/putrescine transport system permease component I
 
 0.584
potI
ABC-type spermidine/putrescine transport system permease component II
 
 
 0.581
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
    
 
 0.528
uxuB
Mannitol-1-phosphate/altronate dehydrogenases
 
  
 0.475
scrK
Fructokinase; Sugar kinases, ribokinase family
 
   
 0.464
fruA
PTS system fructose-specific EIIB'BC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II FruAB PTS system is involved in fructose transport
      
 0.463
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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