STRINGSTRING
intS protein (Xanthomonas campestris campestris) - STRING interaction network
"intS" - Integrase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
intSIntegrase; Belongs to the ’phage’ integrase family (645 aa)    
Predicted Functional Partners:
CAP51763.1
Predicted transcriptional regulator (73 aa)
 
     
  0.772
CAP51768.1
annotation not available (408 aa)
   
        0.762
CAP51821.1
annotation not available (121 aa)
   
          0.750
CAP51767.1
annotation not available (186 aa)
   
   
  0.738
CAP51766.1
annotation not available (547 aa)
 
   
  0.730
CAP51819.1
annotation not available (115 aa)
   
          0.728
CAP51771.1
Single-stranded DNA-binding protein (146 aa)
 
   
  0.727
CAP51765.1
annotation not available (86 aa)
   
          0.727
CAP51770.1
annotation not available (177 aa)
   
          0.720
CAP51824.1
annotation not available (642 aa)
 
          0.712
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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