STRINGSTRING
avrXccC protein (Xanthomonas campestris campestris) - STRING interaction network
"avrXccC" - Avirulence protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
avrXccCAvirulence protein; Glucan-binding domain (YG repeat) (440 aa)    
Predicted Functional Partners:
avrBs1
annotation not available (445 aa)
           
  0.609
hopD
Uncharacterized protein AvrBs1.1; Protein tyrosine phosphatase (356 aa)
           
  0.588
XCC4048
annotation not available (768 aa)
           
  0.587
orfT
annotation not available (76 aa)
              0.522
plaS
Accessory protein; FOG- Ankyrin repeat (254 aa)
           
  0.487
XCC4229
annotation not available (623 aa)
           
  0.481
CAP51422.1
annotation not available (49 aa)
              0.474
iunH
Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family (387 aa)
           
  0.438
avrXccA2
annotation not available (588 aa)
           
  0.433
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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