STRINGSTRING
XCC2108 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2108" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2108Uncharacterized protein; Transcriptional regulator (228 aa)    
Predicted Functional Partners:
CAP51426.1
annotation not available (86 aa)
 
          0.882
XCC2106
annotation not available (44 aa)
   
          0.742
CAP51821.1
annotation not available (121 aa)
   
          0.626
CAP52181.1
annotation not available (627 aa)
   
          0.614
CAP51824.1
annotation not available (642 aa)
   
          0.566
CAP51812.1
annotation not available (954 aa)
 
          0.545
CAP51765.1
annotation not available (86 aa)
   
          0.519
CAP51823.1
annotation not available (208 aa)
   
          0.515
CAP51819.1
annotation not available (115 aa)
   
          0.505
XCC3461
Uncharacterized protein; ATPases of the AAA+ class (982 aa)
   
          0.495
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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