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XCC3142 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3142" - Regulatory protein bphR in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3142Regulatory protein bphR; Transcriptional regulator (294 aa)    
Predicted Functional Partners:
CAP51821.1
annotation not available (121 aa)
   
          0.522
CAP51813.1
annotation not available (254 aa)
   
 
      0.516
CAP51819.1
annotation not available (115 aa)
   
          0.504
CAP51765.1
annotation not available (86 aa)
   
          0.502
CAP51426.1
annotation not available (86 aa)
   
          0.502
CAP51805.1
annotation not available (77 aa)
   
          0.497
CAP51435.1
Transposase and inactivated derivatives (277 aa)
              0.470
CAP51789.1
annotation not available (216 aa)
   
          0.469
CAP51798.1
annotation not available (216 aa)
   
          0.461
CAP51436.1
Putative transposase (88 aa)
     
      0.451
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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