STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrABifunctional aspartokinase/homoserine dehydrogenase I; Aspartokinases (835 aa)    
Predicted Functional Partners:
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily
 0.999
thrC
Threonine synthase; Unnamed protein product
 
 
 0.996
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family
 
 0.994
XCC2856
Cystathionine beta-lyases/cystathionine gamma-synthases
 
 
 0.976
XCC2228
Serine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L- serine, forming succinyl-L-serine. In vitro, has also homoserine succinyl transferase activity; Belongs to the AB hydrolase superfamily. MetX family
 
 
 0.962
metXS
Homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine
 
 
 0.959
XCC2741
Bifunctional diaminopimelate decarboxylase/aspartate kinase; Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family
 
0.959
metH2
5-methyltetrahydrofolate-homocysteine methyltransferase; Methionine synthase I cobalamin-binding domain
  
 
 0.959
dapA1
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
  
 
 0.957
metH1
Methionine synthase I (cobalamin-dependent) methyltransferase domain
  
 
 0.957
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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