STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1829annotation not available (133 aa)    
Predicted Functional Partners:
XCC1830
Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
       0.898
XCC0155
annotation not available
  
     0.726
XCC1169
annotation not available
  
     0.724
XCC0253
annotation not available
  
     0.694
XCC4126
annotation not available
  
     0.655
XCC1401
annotation not available
  
     0.642
XCC0084
annotation not available
  
     0.622
XCC3589
annotation not available
  
     0.620
XCC1583
annotation not available
  
     0.607
XCC1682
Serine kinase of the HPr protein, regulates carbohydrate metabolism
  
     0.594
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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