STRINGSTRING
XCC1836 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1836" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1836annotation not available (82 aa)    
Predicted Functional Partners:
feoA
Fe2+ transport system protein A (96 aa)
 
          0.915
feoB
Fe2+ transport system protein B (619 aa)
              0.898
XCC1144
annotation not available (168 aa)
   
          0.752
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins (296 aa)
   
          0.750
XCC1572
annotation not available (228 aa)
   
          0.739
XCC2931
annotation not available (174 aa)
   
          0.727
XCC3799
annotation not available (125 aa)
   
          0.701
XCC2390
annotation not available (161 aa)
   
          0.700
ilvM
Acetolactate synthase (isozyme II) small (regulatory) subunit (85 aa)
   
          0.674
XCC2215
annotation not available (145 aa)
   
          0.670
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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