STRINGSTRING
carB protein (Xanthomonas campestris campestris) - STRING interaction network
"carB" - Carbamoylphosphate synthase large subunit (split gene in MJ) in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
carBCarbamoylphosphate synthase large subunit (split gene in MJ) (1080 aa)    
Predicted Functional Partners:
carA
Carbamoylphosphate synthase small subunit; Belongs to the CarA family (428 aa)
  0.999
pyrB
Aspartate carbamoyltransferase catalytic chain; Belongs to the ATCase/OTCase family (315 aa)
  0.999
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily (397 aa)
  0.996
pyrC
Dihydroorotase and related cyclic amidohydrolases (449 aa)
 
 
  0.986
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family (488 aa)
 
 
  0.979
pyrF
Orotidine 5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily (243 aa)
 
   
  0.975
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2 (1490 aa)
   
 
  0.956
argF
N-acetylornithine carbamoyltransferase; Catalyzes the conversion of N-acetylornithine to N- acetylcitrulline in an alternative arginine biosynthesis pathway. The enzyme has no activity with ornithine (339 aa)
 
  0.952
glmS2
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (609 aa)
 
  0.945
glnA1
Glutamine synthetase (469 aa)
 
 
  0.939
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (13%) [HD]