STRINGSTRING
XCC1848 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1848" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1848annotation not available (454 aa)    
Predicted Functional Partners:
rpfD
Regulatory protein; Response regulator of the LytR/AlgR family (305 aa)
 
          0.720
rpfI
annotation not available (342 aa)
 
          0.690
XCC1849
annotation not available (281 aa)
 
       
0.689
XCC1850
annotation not available (143 aa)
 
       
0.663
XCC2631
annotation not available (266 aa)
   
          0.625
XCC3158
Predicted aminopeptidases (92 aa)
   
          0.481
XCC2497
Oar protein; Outer membrane receptor proteins, mostly Fe transport (1081 aa)
   
          0.435
pip1
Proline imino-peptidase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) (442 aa)
   
          0.417
CAP49378.1
Antirepressor regulating drug resistance,predicted signal transduction N-terminal membrane component (567 aa)
   
          0.414
XCC1352
Predicted membrane protein (303 aa)
   
          0.404
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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