STRINGSTRING
XCC1849 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1849" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1849annotation not available (281 aa)    
Predicted Functional Partners:
XCC1850
annotation not available (143 aa)
          0.987
rpfD
Regulatory protein; Response regulator of the LytR/AlgR family (305 aa)
 
          0.825
XCC1848
annotation not available (454 aa)
 
       
0.689
pip1
Proline imino-peptidase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) (442 aa)
   
          0.500
XCC0119
Outer membrane receptor proteins mostly Fe transport (922 aa)
   
          0.487
XCC2826
annotation not available (343 aa)
   
          0.484
XCC0120
Outer membrane receptor proteins, mostly Fe transport (1066 aa)
   
          0.457
XCC1749
Outer membrane receptor proteins mostly Fe transport (970 aa)
   
          0.443
XCC3965
annotation not available (337 aa)
   
          0.437
rpfI
annotation not available (342 aa)
              0.437
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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