STRINGSTRING
rpfH protein (Xanthomonas campestris campestris) - STRING interaction network
"rpfH" - RpfH protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpfHRpfH protein; Signal transduction histidine kinase (207 aa)    
Predicted Functional Partners:
rpfG
Response regulator containing a CheY-like receiver domain and an HD-GYP domain (378 aa)
 
 
 
  0.970
rpfC
Sensory/regulatory protein RpfC; Member of the two-component regulatory system RpfG/RpfC, which is required for full virulence and for formation and dispersal of biofilms. Involved in sensing and responding to the diffusible signaling factor (DSF), which is essential for cell- cell signaling. RpfC is probably a sensor of environmental signals, including DSF, which is autophosphorylated at a histidine residue in response to the signal. Then, probably activates RpfG via a four-step phosphorelay. May also negatively regulate the production of DSF, independently of RpfG (By similarity) (726 aa)
 
 
 
0.897
rpfF
RpfF protein; Enoyl-CoA hydratase/carnithine racemase (289 aa)
   
 
  0.810
rpfI
annotation not available (342 aa)
         
  0.636
rpfB
RpfB protein; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (560 aa)
     
   
  0.613
XCC2360
Signal transduction histidine kinase (1364 aa)
   
 
  0.602
gacA
Transcriptional regulator luxR/uhpA family; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain (215 aa)
   
 
  0.568
hpt
Hypoxanthine-guanine phosphoribosyltransferase; Unnamed protein product (184 aa)
           
  0.534
lysU
Lysine--tRNA ligase; Lysyl-tRNA synthetase class II; Belongs to the class-II aminoacyl-tRNA synthetase family (505 aa)
              0.526
XCC0483
Two-component system sensor protein; Signal transduction histidine kinase (767 aa)
   
 
  0.521
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (17%) [HD]