STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1859annotation not available (148 aa)    
Predicted Functional Partners:
rpfB
RpfB protein; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
       0.603
XCC0801
annotation not available
  
     0.562
XCC2872
Uncharacterized protein; ATP/ADP translocase
  
     0.525
XCC1430
annotation not available
  
     0.481
XCC0541
annotation not available
  
     0.476
XCC0025
Uncharacterized protein; Putative peptidase
  
     0.471
XCC2382
annotation not available
  
     0.469
XCC1356
Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats
  
     0.461
XCC0572
annotation not available
  
     0.456
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants
  
     0.441
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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