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XCC1930 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1930" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1930annotation not available (238 aa)    
Predicted Functional Partners:
vioA
Nucleotide sugar transaminase; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family (416 aa)
     
      0.878
rbfC
O-antigen biosynthesis protein; Glycosyltransferases involved in cell wall biogenesis (1208 aa)
     
 
  0.862
XCC1931
Uncharacterized protein; Carbamoylphosphate synthase large subunit (split gene in MJ) (347 aa)
   
        0.846
XCC1929
Uncharacterized protein; SAM-dependent methyltransferases (377 aa)
              0.845
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (436 aa)
     
 
  0.602
rpoN2
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (487 aa)
              0.553
XCC1934
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain (127 aa)
              0.553
fleQ
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains (496 aa)
              0.553
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (540 aa)
   
 
  0.492
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (89 aa)
     
      0.482
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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