STRINGSTRING
flgC protein (Xanthomonas campestris campestris) - STRING interaction network
"flgC" - Flagellar basal-body rod protein FlgC in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgCFlagellar basal-body rod protein FlgC; Unnamed protein product; Belongs to the flagella basal body rod proteins family (135 aa)    
Predicted Functional Partners:
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body (224 aa)
 
   
  0.999
flgE
Flagellar hook protein FlgE; Unnamed protein product (407 aa)
 
   
  0.999
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein (221 aa)
 
 
  0.999
flgG
Flagellar basal-body rod protein FlgG; Unnamed protein product; Belongs to the flagella basal body rod proteins family (261 aa)
 
 
  0.999
flgF
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family (251 aa)
 
   
  0.993
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation (230 aa)
 
   
  0.992
fliA
RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes (255 aa)
 
 
  0.991
flgK
Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family (624 aa)
 
   
  0.989
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (329 aa)
 
   
  0.984
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation (372 aa)
 
   
  0.984
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (29%) [HD]