STRINGSTRING
XCC1958 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1958" - C-di-GMP phosphodiesterase A in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1958C-di-GMP phosphodiesterase A; FOG- EAL domain (573 aa)    
Predicted Functional Partners:
XCC1960
HrpX related protein; Signal transduction histidine kinase (697 aa)
 
     
  0.964
XCC1294
Sensor histidine kinase; FOG- GGDEF domain (578 aa)
 
 
  0.946
XCC3759
GGDEF family protein; FOG- PAS/PAC domain (483 aa)
 
 
  0.935
XCC3523
Histidine kinase/response regulator hybrid protein; FOG- PAS/PAC domain (865 aa)
 
 
 
  0.924
XCC1373
Uncharacterized protein (507 aa)
 
 
  0.911
XCC1445
Sensor histidine kinase; FOG- GGDEF domain (551 aa)
 
 
  0.908
XCC0407
Uncharacterized protein; FOG- GGDEF domain (597 aa)
 
 
  0.871
CAP52102.1
FOG- GGDEF domain (376 aa)
 
 
  0.868
XCC1185
annotation not available (1046 aa)
     
 
  0.862
XCC3519
GGDEF family protein; FOG- GGDEF domain (326 aa)
 
 
  0.860
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (10%) [HD]