STRINGSTRING
XCC1976 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1976" - ATPase related to the helicase subunit of the Holliday junction resolvase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1976ATPase related to the helicase subunit of the Holliday junction resolvase (456 aa)    
Predicted Functional Partners:
XCC3184
Macro domain-containing protein XCC3184; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 (179 aa)
 
        0.784
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (197 aa)
   
   
  0.775
recQ
Superfamily II DNA helicase (600 aa)
 
 
  0.639
comA
DNA uptake/competence protein; Predicted membrane metal-binding protein (796 aa)
 
   
  0.635
kdpB
Potassium-transporting ATPase ATP-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily (682 aa)
     
        0.635
potI
ABC-type spermidine/putrescine transport system permease component II (282 aa)
     
        0.622
XCC2856
Cystathionine beta-lyases/cystathionine gamma-synthases (405 aa)
 
   
  0.621
XCC0598
Cystathionine gamma-lyase-like protein; Cystathionine beta-lyases/cystathionine gamma-synthases (399 aa)
 
   
  0.618
XCC0636
Uncharacterized protein (445 aa)
   
        0.602
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (927 aa)
 
   
  0.552
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (15%) [HD]