STRINGSTRING
CAP51636.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP51636.1" - annotation not available in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51636.1annotation not available (57 aa)    
Predicted Functional Partners:
rlmN
Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family (401 aa)
           
0.792
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (141 aa)
              0.792
XCC1984
Uncharacterized protein conserved in bacteria (284 aa)
              0.779
CAP51638.1
Tfp pilus assembly protein PilF (260 aa)
              0.779
bamB
Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (406 aa)
              0.581
XCC1985
Uncharacterized protein conserved in bacteria (212 aa)
              0.581
der
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis (465 aa)
              0.572
XCC1988
Molybdopterin biosynthesis enzyme (406 aa)
              0.506
psrA
Transcriptional regulator (210 aa)
              0.478
fadB2
3-hydroxyacyl-CoA dehydrogenase (790 aa)
              0.442
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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