STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1995annotation not available (181 aa)    
Predicted Functional Partners:
XCC1994
annotation not available
 
     0.972
XCC1996
Glutathione-dependent formaldehyde dehydrogenase; Threonine dehydrogenase and related Zn-dependent dehydrogenases
 
     0.885
CAP51980.1
annotation not available
  
     0.727
repA
Uncharacterized protein conserved in bacteria
  
     0.726
XCC0573
annotation not available
  
     0.682
tcmJ
annotation not available
  
     0.674
XCC0740
annotation not available
  
     0.651
CAP53627.1
Glycerophosphoryl diester phosphodiesterase
  
     0.640
XCC1082
Oxidoreductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family
 
     0.639
CAP51046.1
Putative peptidoglycan-binding domain-containing protein
  
     0.608
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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