STRINGSTRING
XCC2016 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2016" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2016Uncharacterized protein (394 aa)    
Predicted Functional Partners:
XCC2014
Putative epimerase/dehydratase; Nucleoside-diphosphate-sugar epimerases (349 aa)
 
          0.909
XCC2011
Exopolysaccharide biosynthesis protein; Predicted acyltransferase (361 aa)
 
          0.893
XCC2012
StrU protein; Predicted homoserine dehydrogenase (432 aa)
 
          0.890
XCC1115
annotation not available (643 aa)
   
          0.763
XCC2015
Glucose-1-phosphate cytidylyltransferase; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) (257 aa)
 
          0.760
xcc-b100_1236
Acetyltransferases, including N-acetylases of ribosomal proteins (635 aa)
   
          0.751
XCC0449
Lytic enzyme; RTX toxins and related Ca2+-binding proteins (576 aa)
   
          0.728
fecA2
Outer membrane receptor proteins, mostly Fe transport (890 aa)
   
          0.709
XCC2013
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (193 aa)
   
        0.703
XCC4051
annotation not available (417 aa)
   
          0.698
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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