STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2020Uncharacterized protein conserved in bacteria (169 aa)    
Predicted Functional Partners:
XCC2663
annotation not available
  
     0.663
treA
Periplasmic trehalase; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
  
    0.604
XCC3682
Uncharacterized protein conserved in bacteria
 
    0.599
XCC0075
annotation not available
  
     0.540
XCC3699
Uncharacterized protein; Beta-glucosidase/6-phospho-beta- glucosidase/beta -galactosidase
  
     0.523
XCC1997
annotation not available
  
     0.503
XCC3683
Uncharacterized protein; Mn-containing catalase
 
    0.469
XCC3720
Uncharacterized protein; Putative translation initiation inhibitor yjgF family
  
     0.441
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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