STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2028Uncharacterized protein; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) (654 aa)    
Predicted Functional Partners:
fucA2
Uncharacterized protein; Alpha-L-fucosidase
  
 0.673
CAP51687.1
annotation not available
       0.558
XCC0684
Serine protease; Function unknown
   
 
 0.546
XCC3342
Putative alpha-1,2-mannosidase
 
     0.528
nahA
N-acetyl-beta-hexosaminidase
 
     0.506
bga2
Beta-galactosidase
 
  
 0.502
XCC3428
annotation not available
   
 
 0.499
XCC0955
Peptidyl-Asp metalloendopeptidase; Metalloprotease, specifically cleaves on the N-terminal side of aspartyl, glutamyl and cysteic acid residues
   
 
 0.499
XCC0526
Uncharacterized protein; Chromosome segregation ATPases
    
 
 0.487
smc
Chromosome partition protein Smc; Required for chromosome condensation and partitioning; Belongs to the SMC family
    
 
 0.487
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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