STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2030Signal transduction histidine kinase (423 aa)    
Predicted Functional Partners:
aphB
Phytochrome-like protein; Bacteriophytochrome (light-regulated signal transduction histidine kinase)
 
 
 
 0.627
XCC2924
PilH protein; FOG: CheY-like receiver
 
 
   0.518
XCC2029
Uncharacterized protein; Ketosteroid isomerase homolog
  
    0.511
XCC0483
Two-component system sensor protein; Signal transduction histidine kinase
 
 
0.509
XCC2426
Histidine kinase/response regulator hybrid protein; FOG: PAS/PAC domain
 
 
 0.493
XCC1185
annotation not available
 
 
 
0.492
tctD
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
 
 
   0.486
XCC0824
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
 
 
   0.482
XCC3435
Two-component system regulatory protein; FOG: CheY-like receiver
  
 
   0.468
CAP50779.1
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
  
 
   0.468
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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