STRINGSTRING
XCC2052 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2052" - Uncharacterized protein conserved in bacteria in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2052Uncharacterized protein conserved in bacteria (102 aa)    
Predicted Functional Partners:
XCC2050
annotation not available (463 aa)
 
          0.876
XCC2051
annotation not available (296 aa)
 
          0.853
XCC2177
Hydrolase; Amidases related to nicotinamidase (218 aa)
 
        0.850
XCC2175
Uncharacterized protein; Predicted metal-dependent hydrolase with the TIM-barrel fold (613 aa)
 
          0.845
CAP51715.1
annotation not available (120 aa)
              0.621
XCC2172
Non-heme chloroperoxidase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) (330 aa)
 
          0.594
XCC2174
MFS transporter; Permeases of the major facilitator superfamily (543 aa)
 
          0.465
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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