STRINGSTRING
CAP51721.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP51721.1" - Response regulator of the LytR/AlgR family in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51721.1Response regulator of the LytR/AlgR family (233 aa)    
Predicted Functional Partners:
CAP51722.1
Response regulator of the LytR/AlgR family (530 aa)
 
   
  0.968
CAP51016.1
Predicted signal transduction protein with a C-terminal ATPase domain (341 aa)
 
   
  0.766
XCC3677
annotation not available (436 aa)
 
   
  0.760
algZ
Two-component system sensor protein; Predicted signal transduction protein with a C-terminal ATPase domain (351 aa)
 
   
  0.760
CAP51724.1
No COG number (330 aa)
 
          0.695
XCC2360
Signal transduction histidine kinase (1364 aa)
   
   
  0.656
CAP51723.1
No funccat (290 aa)
              0.625
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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