STRINGSTRING
CAP51728.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP51728.1" - Integrase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51728.1Integrase (322 aa)    
Predicted Functional Partners:
CAP51727.1
Transposase and inactivated derivatives, TnpA family (986 aa)
 
     
  0.959
CAP51729.1
Chromosome segregation ATPases (351 aa)
 
     
  0.904
CAP51421.1
Transposase and inactivated derivatives (68 aa)
 
     
  0.766
XCC2097
Transposase and inactivated derivatives, TnpA family (212 aa)
 
     
  0.759
XCC1287
Oxidoreductase; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases (423 aa)
           
  0.487
XCC2647
Putative monooxygenase NMA2164; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases (392 aa)
           
  0.487
fixL
Sensor histidine kinase; Membrane transporters of cations and cationic drugs (540 aa)
           
  0.483
hisC3
Aminotransferase; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (420 aa)
           
  0.481
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (36%) [HD]