STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51729.1Chromosome segregation ATPases (351 aa)    
Predicted Functional Partners:
CAP51728.1
Integrase
 
   
 0.904
CAP51727.1
Transposase and inactivated derivatives, TnpA family
 
   
 0.877
CAP51421.1
Transposase and inactivated derivatives
  
   
 0.784
XCC2097
Transposase and inactivated derivatives, TnpA family
  
   
 0.753
XCC1064
annotation not available
  
     0.584
CAP52181.1
annotation not available
  
     0.572
CAP50379.1
Integrase
  
   
 0.526
XCC2157
annotation not available
  
     0.520
CAP52472.1
Type V secretory pathway, adhesin AidA
  
     0.513
CAP51045.1
annotation not available
  
     0.505
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (9%) [HD]