STRINGSTRING
CAP51729.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP51729.1" - Chromosome segregation ATPases in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51729.1Chromosome segregation ATPases (351 aa)    
Predicted Functional Partners:
CAP51728.1
Integrase (322 aa)
 
     
  0.904
CAP51727.1
Transposase and inactivated derivatives, TnpA family (986 aa)
 
     
  0.877
CAP51421.1
Transposase and inactivated derivatives (68 aa)
   
     
  0.784
XCC2097
Transposase and inactivated derivatives, TnpA family (212 aa)
   
     
  0.753
XCC1064
annotation not available (228 aa)
   
          0.584
CAP52181.1
annotation not available (627 aa)
   
          0.572
CAP50379.1
Integrase (521 aa)
   
     
  0.526
XCC2157
annotation not available (171 aa)
   
          0.520
CAP52472.1
Type V secretory pathway, adhesin AidA (1331 aa)
   
          0.513
CAP51045.1
annotation not available (275 aa)
   
          0.505
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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