STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trbPannotation not available (216 aa)    
Predicted Functional Partners:
XCC2542
annotation not available
  
     0.768
XCC1902
annotation not available
  
     0.740
XCC1138
annotation not available
  
     0.718
CAP51735.1
annotation not available
       0.688
CAP49938.1
annotation not available
  
     0.682
CAP49830.1
Uncharacterized conserved protein
  
     0.579
CAP49937.1
annotation not available
  
     0.568
XCC3871
Mn2+-dependent serine/threonine protein kinase
  
     0.556
XCC0131
annotation not available
  
     0.555
XCC0770
Uncharacterized protein
  
     0.543
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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