STRINGSTRING
trbP protein (Xanthomonas campestris campestris) - STRING interaction network
"trbP" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trbPannotation not available (216 aa)    
Predicted Functional Partners:
XCC2542
annotation not available (172 aa)
   
          0.768
XCC1902
annotation not available (333 aa)
   
          0.740
XCC1138
annotation not available (351 aa)
   
          0.718
CAP51735.1
annotation not available (240 aa)
              0.688
CAP49938.1
annotation not available (438 aa)
   
          0.682
CAP49830.1
Uncharacterized conserved protein (265 aa)
   
          0.579
CAP49937.1
annotation not available (222 aa)
   
          0.568
XCC3871
Mn2+-dependent serine/threonine protein kinase (219 aa)
   
          0.556
XCC0131
annotation not available (223 aa)
   
          0.555
XCC0770
Uncharacterized protein (307 aa)
   
          0.543
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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