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XCC2086 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2086" - UPF0176 protein XCC2086 in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2086UPF0176 protein XCC2086; Predicted sulfurtransferase; Belongs to the UPF0176 family (253 aa)    
Predicted Functional Partners:
XCC2087
annotation not available (121 aa)
              0.755
gacA
Transcriptional regulator luxR/uhpA family; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain (215 aa)
 
 
      0.619
XCC0225
Pseudouridylate synthases, 23S RNA-specific (258 aa)
            0.601
fkpA2
FKBP-type peptidyl-prolyl cis-trans isomerases 1 (161 aa)
              0.559
XCC2089
Predicted flavoproteins (417 aa)
              0.549
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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